CDS
| Accession Number | TCMCG015C63578 |
| gbkey | CDS |
| Protein Id | XP_027100054.1 |
| Location | complement(join(8757244..8757307,8757392..8757460,8757549..8757665,8758607..8758719,8758817..8758891,8759745..8759870,8760463..8760584,8760660..8760719,8762510..8762896,8763102..8763330,8763473..8763616,8763697..8763771,8763930..8764000,8765764..8765866,8766577..8766803,8766899..8767014,8767460..8767470)) |
| Gene | LOC113719157 |
| GeneID | 113719157 |
| Organism | Coffea arabica |
Protein
| Length | 702aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027244253.1 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGCCGTTCTGCTTGTCTGGCCATTCAAGCGGAATAGATTCTGTTAGCTTTGATTCTTCAGAAGTGTTGGTAGCTGCTGGAGCTGCTAGTGGTACTATCAAGCTTTGGGATTTGGAGGAGGCCAAGATTGTTCGCACCCTCACTGGTCATCGATCAAACTGCATTTCTTTGGACTTTCATCCCTTTGGGGAGTTCTTTGCGTCTGGCTCCTTGGACACCAATTTAAAGATATGGGATATCAGAAGGAAAGGCTGTATACACACTTACAAGGGGCACACTCGAGGTGTCAATGCCATCCGGTTTACACCAGATGGTCGTTGGGTTGTCTCTGGTGGAGAGGACAACACTGTCAAGCTGTGGGATTTAACAGCGGGAAAGCTGTTGCATGATTTTAAGTGTCATGATGGCCAGATTCAGTGCATTGATTTTCATCCCCACGAGTTCCTGCTGGCAACAGGTTCAGCTGACAAAACTGTGAAATTTTGGGATCTTGAAACGTTTGAACTGATAGGCTCTTCTGGGCCTGAGACCACAGGAGTGCGTTGCATGACTTTTAATCCTGATGGTAAAACACTTCTCTGTGGGCTGCACGAGAGCTTGAAGGTTTACTCTTGGGAACCAATCCGCTGTCATGATACAGTCGACGTGGGGTGGTCAAGATTGTCTGACCTTAGTATTGATGAAGGAAAGCTTCTTGGATGTTCATATAACCAGAGTTGTGTCGGCGTATGGGTTGTAGACATCTCTCGAATTGAGCCTTATGCGATGGGAAGCACAACTCTGTTAAATGGCCAATCAGAAATGAAATCCGGTTCAAGTGGGAATCTGTCTGTGCCTGTTGAGGATATTGCTAAAGCCAGTTTGGGCAGGCTGTCCATTTTACAAAATTCAGATTCAGTAAAAGAAGCTAAATCTTCTGGTCGACTTTCCACATCGCAAAACTCAGACCTCAACAAGGAATCTAAACCTCTTTCATCTACTGGAACTGTACCTGGTACTCCTCACAGGGTAAATCTTGGTGCTGGTCAAAAAGTTGCTCCAATTGGTAATGCAGTTGTTCCCAATGTAGCAGCCCCAAAGAGAAATGCTGTAAAAGTCCAGCCAGTGGCTACCACTTCAATCATCAACAGGTCAGACGTGATACCTGTGGTTGTCCCACGAAATAATTTGAGGTTCGAACAGGCAGCAGAATCAAGGAAAGAGGGAATCATTGCAAGAACAATGCCATTATCCTTGCAATCAAGAGGATCTTCTAATATCAGAGATGAAATTGAGAGGCCAATTGCTTCTCCAAAGCCTGAAAGTCAGGTTGCAAAGGCAGCTGATTTGAGTGGACTTACAGAAAGGAAGACTATTCCTGCAGATGAAACTCGTGGCCCAAATGTTAATAGAGAATCAAATATGAGTGAAGGTAAAAGAGCAGGAAGAACACGTTCGCTGGTCGCCAACTGGGAGAGGAGAGAGAGAGTAACTTATAGTGAGGGTCTTGCCACCAGCAATATTCCTGTGACAATTCATGCCATAAACACTCGAACAACTAGTGTGGGAGGCCAGACTTTAACACCTGAAAGTGAGATGGTTTCTACTAGTGAAGAGGATGTTATTGCTGACTTGATGAAACATCATGACGAATTTGTTGGCTCAATGCATTCACGTTTAATTAAATTGCAGATGATCCATAACCACTGGCAAAGGCATGATGTTAAAGGTGCCCTTAGTGCAATGGAGAAGATGGGCGATCATGGAGTCATTGCCGATGTAATAAGCCTTGTGACAGAAAAAGCTGATATTGTAACATTAGATATCTGCACCTGTCTCCTGCCACTTCTCAATGGGCTTCTTGAAAGTGAGATGGACAGGCATCAAAATATCTCATTGGAGATGCTTCTGAAGCTGGTCAGAGTATTTGGGTCAGTAATATATTCTTCTATATCAGCACCTTCATCCGTAGGAGTGGATATTGAGGCAGAGCAAAGGTTGGAACGCTGCAATACATGCTTTGTTGAGCTTGAAAAGGTTAAGCGTTGCTTGCCTGTGCTTTGCAGAAGAGGTGGTTCAATTGCCAAGTCGGCACACGAGTTAAATCTAGCACTTCAAGAAGTTTCATGA |
| Protein: MPFCLSGHSSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASGSLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHDGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSSGPETTGVRCMTFNPDGKTLLCGLHESLKVYSWEPIRCHDTVDVGWSRLSDLSIDEGKLLGCSYNQSCVGVWVVDISRIEPYAMGSTTLLNGQSEMKSGSSGNLSVPVEDIAKASLGRLSILQNSDSVKEAKSSGRLSTSQNSDLNKESKPLSSTGTVPGTPHRVNLGAGQKVAPIGNAVVPNVAAPKRNAVKVQPVATTSIINRSDVIPVVVPRNNLRFEQAAESRKEGIIARTMPLSLQSRGSSNIRDEIERPIASPKPESQVAKAADLSGLTERKTIPADETRGPNVNRESNMSEGKRAGRTRSLVANWERRERVTYSEGLATSNIPVTIHAINTRTTSVGGQTLTPESEMVSTSEEDVIADLMKHHDEFVGSMHSRLIKLQMIHNHWQRHDVKGALSAMEKMGDHGVIADVISLVTEKADIVTLDICTCLLPLLNGLLESEMDRHQNISLEMLLKLVRVFGSVIYSSISAPSSVGVDIEAEQRLERCNTCFVELEKVKRCLPVLCRRGGSIAKSAHELNLALQEVS |